Big Idea 1

1. Big Idea 1 Ch. 26 – The Tree of Life

2. Geologic history and biological history have been episodic, marked by revolutions that opened many new ways of life

3. Conditions on early Earth made the origin of life possible • Chemical and physical processes on early Earth may have produced very simple cells through a sequence of stages: 1. Abiotic synthesis of small organic molecules 2. Joining of these small molecules into polymers 3. Packaging of molecules into “protobionts” (spherical collection of lipids proposed as a stepping-stone to the origin of life) 4. Origin of self-replicating molecules (like cells)

4. Synthesis of Organic Compounds on Early Earth • Earth formed about 4.6 billion years ago, along with the rest of the solar system • Earth’s early atmosphere contained water vapor and chemicals released by volcanic eruptions • Experiments simulating an early Earth atmosphere produced organic molecules from inorganic precursors • Instead of forming in the atmosphere, the first organic compounds may have been synthesized near submerged volcanoes and deep-sea vents

5. Protobionts • Small organic molecules polymerize when they are concentrated on hot sand, clay, or rock • Protobiontsare aggregates of abiotically produced molecules surrounded by a membrane or membrane-like structure • Experiments demonstrate that protobionts could have formed spontaneously from abiotically produced organic compounds • For example, small membrane-bounded droplets called liposomes can form when lipids or other organic molecules are added to water

6. The “RNA World” and the Dawn of Natural Selection • The first genetic material was probably RNA, not DNA • RNA molecules called ribozymes have been found to catalyze many different reactions, including: • Self-splicing • Making complementary copies of short stretches of their own sequence or other short pieces of RNA • Early protobionts with self-replicating, catalytic RNA would have been more effective at using resources and would have increased in number through natural selection

7. The fossil record chronicles life on Earth • Fossil study opens a window into the evolution of life over billions of years • Sedimentary strata reveal the relative ages of fossils

8. Fossils cont. • Index fossils are similar fossils found in the same strata in different locations • They allow strata at one location to be correlated with strata at another location

9. Fossils cont. (dating fossils) • The absolute ages of fossils can be determined by radiometric dating • The magnetism of rocks can provide dating information • Magnetic reversals of the magnetic poles leave their record on rocks throughout the world

10. The Geologic Record • By studying rocks and fossils at many different sites, geologists have established a geologic record of Earth’s history • The geologic record is divided into three eons: the Archaean, the Proterozoic, and the Phanerozoic • The Phanerozoic eon is divided into three eras: the Paleozoic, Mesozoic, and Cenozoic • Each era is a distinct age in the history of Earth and its life, with boundaries marked by mass extinctions seen in the fossil record *There have been 5 major extinctions *You do not need to know the names and dates of these extinctions for the exam • Lesser extinctions mark boundaries of many periods within each era

11. Mass Extinctions • The fossil record chronicles a number of occasions when global environmental changes were so rapid and disruptive that a majority of species were swept away • The Permian extinction killed about 96% of marine animal species and 8 out of 27 orders of insects • It may have been caused by volcanic eruptions • The Cretaceous extinction doomed many marine and terrestrial organisms, notably the dinosaurs • It may have been caused by a large meteor impact • Mass extinctions provided life with unparalleled opportunities for adaptive radiations into newly vacated ecological niches Chicxulub crater Yucatán Peninsula

12. Millions of years ago 600 500 400 300 200 100 0 100 2,500 Number of taxonomic families 80 2,000 Permian mass extinction ) Extinction rate LE 26-8 60 1,500 Number of families ( Extinction rate ( 40 1,000 Cretaceous mass extinction ) 20 500 0 0 Cambrian Ordovician Silurian Devonian Carboniferous Permian Triassic Jurassic Cretaceous Paleogene Neogene Proterozoic eon Ceno- zoic Paleozoic Mesozoic

13. A clock analogy can be used to place major events in the context of the geological record

14. As prokaryotes evolved, they exploited and changed young Earth • The oldest known fossils are stromatolites, rocklike structures composed of many layers of bacteria and sediment • Stromatolites date back 3.5 billion years ago • Prokaryotes were Earth’s sole inhabitants from 3.5 to about 2 billion years ago

15. Photosynthesis and the Oxygen Revolution • Electron transport systems were essential to early life • The earliest types of photosynthesis did not produce oxygen • Oxygenic photosynthesis probably evolved about 3.5 billion years ago in cyanobacteria

16. Effects of oxygen accumulation in the atmosphere about 2.7 billion years ago: • Posed a challenge for life • Provided opportunity to gain energy from light • Allowed organisms to exploit new ecosystems

17. Eukaryotic cells arose from symbioses and genetic exchanges between prokaryotes • The oldest fossils of eukaryotic cells date back 2.1 billion years • Among the most fundamental questions in biology is how complex eukaryotic cells evolved from much simpler prokaryotic cells • The theory of endosymbiosisproposes that mitochondria and plastids were formerly small prokaryotes living within larger host cells • The prokaryotic ancestors of mitochondria and plastids probably gained entry to the host cell as undigested prey or internal parasites • In the process of becoming more interdependent, the host and endosymbionts would have become a single organism

18. Cytoplasm DNA Plasma membrane Ancestral prokaryote Infolding of plasma membrane Endoplasmic reticulum LE 26-13 Nucleus Nuclear envelope Engulfing of aerobic heterotrophic prokaryote Cell with nucleus and endomembrane system Mitochondrion Mitochondrion Engulfing of photosynthetic prokaryote in some cells Ancestral heterotrophic eukaryote Plastid Ancestral photosynthetic eukaryote

19. Key evidence supporting an endosymbiotic origin of mitochondria and plastids: • Similarities in inner membrane structures and functions • Both have their own circular DNA

20. Eukaryotic Cells as Genetic Chimeras • Endosymbiotic events and horizontal gene transfers may have contributed to the large genomes and complex cellular structures of eukaryotic cells • Eukaryotic flagella and cilia may have evolved from symbiotic bacteria, based on symbiotic relationships between some bacteria and protozoans

21. The Earliest Multicellular Eukaryotes • Molecular clocks date the common ancestor of multicellular eukaryotes to 1.5 billion years • The oldest known fossils of eukaryotes are of relatively small algae that lived about 1.2 billion years ago • Larger organisms do not appear in the fossil record until several hundred million years later • Chinese paleontologists recently described 570-million-year-old fossils that are probably animal embryos

22. 150 mm 200 mm LE 26-15 Later embryonic stage (SEM) Two-celled stage of embryonic development (SEM)

23. The Colonial Connection • The first multicellular organisms were colonies, collections of autonomously replicating cells • Some cells in the colonies became specialized for different functions

24. The “Cambrian Explosion” • Most of the major phyla of animals appear in the fossil record of the first 20 million years of the Cambrian period • Two animal phyla, Cnidaria(jellyfish) and Porifera (sea sponge), are somewhat older, dating from the late Proterozoic • Molecular evidence suggests that many animal phyla originated and began to diverge much earlier, between 1 billion and 700 million years ago

25. 500 Sponges Cnidarians Echinoderms Chordates Brachiopods Annelids Molluscs Arthropods Early Paleozoic era (Cambrian period) LE 26-17 Millions of years ago 542 Late Proterozoic eon

26. New information has revised our understanding of the tree of life • Early classification systems had two kingdoms: plants and animals • Robert Whittaker proposed five kingdoms: Monera, Protista, Plantae, Fungi, and Animalia • Molecular data have provided insights into the deepest branches of the tree of life • The five kingdom system has been replaced by three domains: Archaea, Bacteria, and Eukarya • Each domain has been split into kingdoms