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Specimen Collection, Handling and Testing

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Specimen Collection, Handling and Testing

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  1. To view the notes associated with this PowerPoint presentation, clickthe Edit button along the top tool bar and select the Edit Slides option.

  2. Specimen Collection, Handling and Testing

  3. Clinical Specimens • BT agents may not be initially suspected. • Exposed/ill patients will be seen in ER’s, clinics, offices. • Collect appropriate specimens based on patient symptoms.

  4. Nasal Cultures? • NOT recommended for asymptomatic patients with no known exposure. • Sensitivity and specificity unknown • A positive or negative nasal swab does not predict infection. • Collected for epidemiology purposes ONLY after consult with MDCH.

  5. Specimen Collection • Anthrax • Cutaneous: lesion material • Inhalation: Blood, sputum • Gastrointestinal: Blood, stool

  6. Specimen Collection • Brucellosis • Blood • Bone Marrow • Serum

  7. Specimen Collection • Plague • Pneumonic: Bronchial wash, TTA • Septicemic: Blood • Bubonic: Tissue, aspirate

  8. Specimen Collection • Tularemia • Blood • Biopsy • Swab

  9. Specimen Collection • Botulism Toxin • Stool • Serum • Autopsy • Food

  10. Specimen Collection • Melliodosis/Glanders • Blood • Bone marrow • Sputum/bronchial washing • Urine • Abscess, tissues, aspirate, fluids

  11. VTM MDCH Kit No. 20

  12. Smallpox Specimens • Vesicular Fluid • Vesicular Roof • Vesicular Swab • Scabs • Biopsy • Blood and Serum • Throat swab • Autopsy tissues

  13. Specimen Handling • Clinical • Follow storage guidelines established by laboratory processing specimens • Universal precautions • Proper packaging and shipping

  14. Specimen Collection, Processing & ShippingExposure to Chemical Agents

  15. Specimens Required by CTLN • Urine-25 ml, screw capped container, no preservative, frozen • Whole blood, two 5 or 7 ml EDTA(purple), unopened, 4 C. • Whole blood, one 5 or 7 ml gray or green, 4 C, plus an empty tube for each lot used as a blank. • Whole blood, two 10 ml red (not SST or gel), DO NOT centrifuge, 4 C.

  16. Recommended Times of Specimen Collection • Blood should be collected as soon as possible after exposure • Urine should be collected 7-8 hrs after exposure • Testing is largely used to rule out exposure (worried well) or document exposure, cause of death

  17. Processing & Shipping (per the CDC for chemical agents) • Before shipping specimens contact MDCH or CDC. • Specimens should be labeled with identification #, collector’s initials, date & time (patient names should not be included). “De-identify”. • Sample identification # & patient names should be maintained by the submitter. • Results will be reported with identification # • Use chain of custody form and forensic tape to seal tubes and packages

  18. Processing & Shipping(continued) • Use cool packs for blood and dry ice for urine • Package urine and blood separately • Include a shipping list of specimens with ID #s • Include a contact name and phone # • Label outside of box with: • Non-infectious, diagnostic specimens, packed in compliance with IATA, packing instructions 650

  19. Contact Information • MDCH Bureau of Laboratories 517-335-8063 • Division of Chemistry and Toxicology 517-335-9490 Shipping address: PO Box 30035, 3350 North Martin Luther King Jr. Blvd, Lansing, MI 48909 After hours emergencies, 517-335-9030

  20. Rapid Toxic Screen: Groups of Chemical Agents • Nerve Agents (metabolites of parent agent) • Sulfur mustards (metabolite) • Nitrogen Mustards (metabolite) • Lewisite Agents • Hydrogen Cyanide • Volatile Agents (Phosgene, Vinyl Chloride) • Heavy Metals (lead, arsenic, cadmium, uranium)

  21. Rapid Handheld Equipment for Chemical Agents • Several vendors are now marketing products that may meet this need. • One high profile example is Airport Security instrumentation for explosives, illicit drugs and chemical warfare agents. • Mobile labs for biological and chemical agents are being designed. • Rapid testing is needed to make decisions but confirmation will be required • This area of laboratory testing is unregulated & performed by non-lab personnel

  22. What about other Specimens to be Tested for Chemical Agents? • Laboratory expertise and testing capabilities can vary greatly with the specimen type • In human specimens, testing may target metabolites and not the parent compound • In non-clinical testing( unknowns, liquids, solids) testing will likely target parent compound • Foods and veterinary specimens need also be included in the preparedness plan • Funding is needed to develop all of these testing programs

  23. Michigan Emergency Management Plan & Laboratory • Office of Public Health Preparedness: provides interdepartmental coordination of preparedness • MI Department of Environmental Quality: environmental, pesticides, chemical, nuclear, water. • MI Department of Agriculture: food safety, • 51st WMD Civil Support Team via MSP (explosives,nuclear, biological, chemical) • MI Poison Centers: Detroit & Grand Rapids, • 800-222-1222

  24. Michigan Emergency Management Plan & Lab (continued) • MI Dept Labor & Economic Growth • MSU Diagnostic Center for Population & Animal Health Laboratory: veterinary specimens

  25. Safety

  26. Safety – Chemical & Infectious Agents • Mixing of infectious and chemical agents is a real possibility in a BT incident • Best solution is still under development • Gamma irradiation of specimens prior to chemical analysis is being evaluated by the CDC

  27. Safety-Clinical Specimens • BSL-2 • Processing specimens • BSL – 3 • Culture manipulations that might produce aerosols

  28. Safety – Clinical Specimens • Standard Infection Control Practices: • Wash hands • Wear PPE- as appropriate • Process contaminated supplies • Clean and disinfect environmental surfaces • Follow occupational health/blood-borne pathogen procedures

  29. Environmental Testing for BT Agents • What do you do if you have a suspicious item? • Notify law enforcement • What will they do? • Threat assessment, package and transport sample. • Compile a list of contacts to the item

  30. Sample Submission • All testing is approved by the FBI after a threat assessment has been performed • Each sample must be certified risk-free before the lab will accept it for testing • Chain of Custody is initiated at delivery of the sample to the laboratory • Priority of testing is determined by the FBI and the Bureau’s of Epidemiology and Laboratories at MDCH

  31. Environmental Samples for BT Agents • Rapid field testing may be done by law enforcement, HazMat or 1st responders • CDC has not yet endorsed any of the rapid field tests for BT agents • Samples must always also be tested at Public Health Laboratories for definitive result • MDCH will test environmental samples including packages, liquids, letters, swabs and food.

  32. Packaging Environmental Samples • All samples will be triple bagged as evidence by law enforcement or HazMat • All samples will be transported by the FBI WMD Coordinator or another law enforcement agency • Transported using only one vehicle • Transporting officer stays with sample at all times

  33. Environmental Laboratory Testing • Samples obtained in an investigation will go to the MDCH laboratory for testing • Samples submitted will be preserved as evidence • Samples will be retained at MDCH until a final negative report is issued • Samples are released to the FBI • If part of a law enforcement investigation, samples are sent to the MSP Forensic Laboratory or an FBI facility • If no law enforcement action is to be taken, samples are returned to the submitter or destroyed

  34. How to Take Environmental Swabs

  35. Lab Results • Reports on environmental specimens submitted to MDCH go to: • FBI • Local Public Health Department • MDCH Bureau of Epidemiology

  36. Specimens Submitted to MDCH • White powder hoaxes received from October 2001until 12/31/03 • 265 environmental specimens • 128 Postal Service specimens • All were cleared by local law enforcement and the FBI • None were positive for B. anthracis

  37. Rapid Hand-Held Assays forBiological Specimens • HHS – does not recommend use • False positives • False negatives • Sensitivity/specificity • Requires confirmation

  38. Chain of Custody • Chronological written record • Acquisition until final disposition • Assures continuous accountability • Considered confidential/classified • Maintained in a secure location

  39. Chain of Custody • Each chain of custody form is agency specific • If a sample is transferred to a second agency that agency will start another chain of custody form for the time that the sample remains in its custody • Each agency is responsible for retaining records regarding sample

  40. Chain of Custody • Each person signing the form is responsible for the care and preservation of that sample while in their possession • Form will account for all persons handling the sample • Who obtained • Who delivered • Who tested • Who disposed • Those signing may be called on to testify in a criminal proceeding

  41. Chain of Custody • Form will include: • Sample information • Source • Condition • Collecting/Submitting agency information • Contact information • Internal and external transfer information • Transferred to whom, for what purpose • Destruction of sample information

  42. sampler: (name) agency: ___________ date: ____________ time: ____________ condition: ___________ ___________________ Chain of Custody Product: ____________________ Sample Source: ______________ transferred to: (name) agency: _____________ date: ________________ time: ________________ condition: ____________ ____________________ signature: ____________

  43. Helpful Websites • www.bt.cdc.gov/ • www.dhs.cahwnet.gov/ps/deodc/ehlb/cabu • www.cbwinfo.com/Chemical/CWList.shtml • www.asm.org • www.upmc-biosecurity.org • www.mipreparedness.org

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