1 / 13

Motif finding

Motif finding. Stat2 120m. E-value 5.1e-202 Width 16 Sites 148 (200 peaks used). Jaspar Stat1 motif. Stat1 120 m. E-value 5.9e-319 Width 16 Sites 198 (200 peaks used). Jaspar Stat1 motif. Irf1 (120 min). -value 3.3e-130 Width 16 Sites 74 (200 peaks used). Jaspar Irf1 Motif.

alton
Télécharger la présentation

Motif finding

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript


  1. Motif finding

  2. Stat2 120m E-value 5.1e-202 Width 16 Sites 148 (200 peaks used) Jaspar Stat1 motif

  3. Stat1 120 m E-value 5.9e-319 Width 16 Sites 198 (200 peaks used) Jaspar Stat1 motif

  4. Irf1 (120 min) -value 3.3e-130 Width 16 Sites 74 (200 peaks used) Jaspar Irf1 Motif

  5. Ctcf 30 min E-value 3.5e-244 Width 15 Sites 176 (200 peaks used) JasparCtcf motif

  6. PU.1 120m E-value 2.7e-391 Width 13 Sites 271 (200 peaks used) PU.1 Transfac

  7. cFos 120 m E-value 1.8e-215 Width 15 Sites 108 (200 peaks used) Motif 3 E-value 1.3e-002 Width 11 Sites 24 (200 peaks used) JasparNfyA motif Jaspar Hap3 motif

  8. Atf3 120 m E-value 5.6e-197 Width 16 Sites 162 (200 peaks used) Jaspar Creb1 motif Transfac Atf1 motif

  9. Cebpb 120 m E-value 4.3e-056 Width 11 Sites 127 (200 peaks used) TransfacCebpb motif

  10. cRel 120m E-value 5.0e-011 Width 11 Sites 43 (200 peaks used) Transfaccrel motif Transfac NF-kappa-B motif

  11. E2f4 120m Motif 1 E-value 2.6e-053 Width 16 Sites 85 200 peaks used Motif 2 E-value 7.5e-014 Width 13 Sites 36 (200 peaks used) Transcfac NF-Y Jasper NFYA Transfac E2f1 Motif 1 Motif 2

  12. Relb 120m E-value 1.3e+000 Width 16 Sites 26 (200 peaks used) TransfacRel Motif 3

  13. Nrf2 120m Motif 1 E-value 7.2e-028 Width 16 Sites 17 200 peaks used Motif 2 E-value 3.9e-007 Width 15 Sites 10 (200 peaks used) Motif 3 E-value 1.9e-002 Width 11 Sites 10 (200 peaks used) Jaspar Atf2 Jaspar Rpn4 Motif 2 Motif 3

More Related