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Moss P. patens CHS Superfamily Genes: Gene Expression and Location

Explore the gene expression and location of the CHS superfamily genes in the moss P. patens, including sequence identity and remarks on various gene variants. This study sheds light on the diversity and characteristics of CHS genes in moss.

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Moss P. patens CHS Superfamily Genes: Gene Expression and Location

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  1. Gene Expression CHS superfamily genes from the moss P. patens Gene Gene location Seq. identity Remarks Scaffold:base to PpCHS (%) PpCHS1a 500:7515799.2 No intron. Differ at 3 a.a. from PpCHS PpCHS01 22:1226899.5 Differ at 2 a.a. and 3′-UTR from PpCHS1a PpCHS1c 426:23863799.2 Differ at 3′-UTR from PpCHS1a PpCHS2a 463:9983894.0 One intron splits Cys72 PpCHS2b.1 463:12962494.0 Differ at 5′-UTR from PpCHS2a PpCHS2c 1:8118194.0 Differ at 3′-UTR from PpCHS2a PpCHS3.1 303:6937889.6 No intron PpCHS3.2 303:7931989.6 Another copy of PpCHS3.1 PpCHS3.3 292:105089.6 Another copy of PpCHS3.1 PpCHS4 39:1774363 91.6 No intron PpCHS5.1 365:13178390.1 No intron PpCHS5.2 365:15177790.1 Another copy of PpCHS5.1 PpCHS6 228:27634985.5 One intron splits Cys76 PpCHS7 425:8287489.7 No intron PpCHS9 25:249014142.1 One intron splits Cys77 PpCHS10 304:41981238.2 Two introns split Cys88 and Gly333 PpCHS11 34:106656733.0 Two introns split Cys80 and Arg348 PpCHS 410:292865 100 49 bp 5′-UTR, 847 bp cds PpCHS13b 16:2859768 (100) 506 bp 5′-UTR, 369 bp cds PpCHS13c 16:2867184 1142 bp containing 228 bp 3′-UTR PpCHS2b.2 76:1642269 492 bp cds, another copy of PpCHS2b.1

  2. Light Dark Rebound Light Responsiveness of PpCHS genes PpCHS genes

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