'Sequence identity' diaporamas de présentation

Homology Modeling

Homology Modeling. Masa Watanabe University of California - Merced. Part 1 Monday 1:30-3:00pm. Homology Modeling - I (Comparative Modeling). What is it and why do we need it? principles of modeling, applications available Using Swiss-Model preparation, workspace tools, automated-mode

1.36k views • 69 slides

CSCI6904 Genomics and Biological Computing

671 views • 56 slides

Plant Ecology klaus.ammann@ips.unibe.ch Sabanci University Spring 2009

769 views • 56 slides

PSI Structural Genomics Knowledgebase

PSI Structural Genomics Knowledgebase. Helen M. Berman, Rutgers University EMBO Practical Course Section: Searching Structure Databases September 26, 2008. Knowledgebase. Knowledgebase Vision.

535 views • 41 slides

Advanced Tools and Algorithms in Bioinformatics Chittibabu Guda Summer, 2004

538 views • 40 slides

Exploiting Structural and Comparative Genomics to Reveal Protein Functions

Exploiting Structural and Comparative Genomics to Reveal Protein Functions. How many domain families can we find in the genomes and can we predict the functions of relatives? Exploiting protein structure to predict protein functions

508 views • 37 slides

CSCE555 Bioinformatics

CSCE555 Bioinformatics. Lecture 18 Protein Tertiary Structure Prediction Meeting: MW 4:00PM-5:15PM SWGN2A21 Instructor: Dr. Jianjun Hu Course page: http://www.scigen.org/csce555. University of South Carolina Department of Computer Science and Engineering 2008 www.cse.sc.edu. Outline.

485 views • 36 slides

Classification of protein and domain families

Protein Family Resources and Protocols for Structural and Functional Annotation of Genome Sequences. Domain structures. Domain structure predictions. Classification of protein and domain families. Structure to function. Sequence to function. H. A. T. C. Fold Group (1100).

536 views • 34 slides

Structure Prediction and Modeling of a Eukaryotic Member of the Major Facilitator Superfamily

Structure Prediction and Modeling of a Eukaryotic Member of the Major Facilitator Superfamily. Gaurav Narale. Major Facilitator Superfamily (MFS). MEMBRANE TRANSPORT Largest secondary transporter protein family known so far with more than 1000 members identified. 1

486 views • 33 slides

Genome scan for cis -regulatory DNA motifs associated with social behavior in honey bees

Genome scan for cis -regulatory DNA motifs associated with social behavior in honey bees. Saurabh Sinha, Xu Ling, Charles W. Whitfield, Chengxiang Zhai, Gene E. Robinson PNAS 2006. Motivation. Background Social regulation: nursing vs. foraging Switching by age Switching by need

421 views • 29 slides

Rita Casadio

377 views • 24 slides

The USC Microbial Observatory

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CS480-01 Computer Science Seminar Fall, 2002

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New SNPs: Sift, Polyphen, etc.

409 views • 20 slides

Structural alignment

Structural alignment. marian@xray.bmc.uu.se. Protein structure. Every protein is defined by a unique sequence (primary structure) that folds into a unique shape (tertiary or three-dimensional structure). However, proteins with similar sequences adopt very similar structures.

307 views • 20 slides

Multiple alignment using hidden Markove models

Multiple alignment using hidden Markove models. November 21, 2001 Kim Hye Jin Intelligent Multimedia Lab marisan@postech.ac.kr. Outline. Introduction Methods and algorithm Result Discussion. IM lab. Introduction| why HMM. Introduction. Why HMM?

261 views • 17 slides

DoD Global Influenza Surveillance Program Sentinel Site Surveillance at AFIOH

DoD Global Influenza Surveillance Program Sentinel Site Surveillance at AFIOH. Sequence Analysis And Vaccine Effectiveness Overview. Luke T. Daum, PhD, Molecular Biologist Angela Owens, MPH, Epidemiologist Air Force Institute for Operational Health Brooks City-Base, TX. Sentinel Sites.

303 views • 15 slides

Percentage of Domain Sequences in Genomes

Genome Coverage by Domain Superfamilies. excluding singletons And filtering. excluding singletons. all. Percentage of Domain Sequences in Genomes. ~50% of domain sequences in the genomes are contained in ~1000 CATH/SCOP domain superfamilies

161 views • 7 slides

Question 1:

Question 1: You have joined a lab for your graduate studies and your project is to study a mutation in MCL1 that was discovered in an Argentinian family with a history of cancer.

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AB: green GH: yellow MN: blue CD: light blue IJ: pink OP: orange

178 views • 1 slides