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MS/MS Spectra and Ion Tables of Phosphorylated Peptides in KO and WT Samples Analysis

This document presents the MS/MS spectra and associated b and y ion tables for phosphorylated peptides identified in knock-out (KO) and wild-type (WT) samples. Only peptides with a Debunker or A score below the specified cut-off value are included. Key examples include phosphorylated residue SSWWMLNPEGGKSGKS and its corresponding MS data showcasing various ions involved in fragment analysis. This detailed examination aids in understanding the phosphorylation dynamics and peptide characteristics across different samples.

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MS/MS Spectra and Ion Tables of Phosphorylated Peptides in KO and WT Samples Analysis

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  1. Figure S1 additional MS/MS Spectra and b, y ion tables of Phosphorylated Peptides in KO and WT samples, whose Debunker or A score is lower than the cut-off value. (Δ Indicate to phosphorylated residue)

  2. SSWWMLNPEGGKSGKSΔPR 7 [M+2H]2+ m/z: 1042.98 MH-H3PO42+ y11 y11-H3PO4 b15 y12-H3PO4 y9-H3PO4 y12 b8 y6-H3PO4 b6 y4-H3PO4 y6 b16-H3PO4 y3 MH-H3PO43+ y13-H2O y3-H3PO4 y14 b7 b16 b17+H2O

  3. YSFAPPNTSLNSPSΔPNYSK 10 [M+2H]2+ m/z: 1076.48 y152+ y14 y5 y8 y7 b12-H2O y15 b12 MH-H3PO42+ y9-H3PO4 y142+ y15-H2O b4 y7-H3PO4 b14-H3PO4 b11 b3-H2O b13 b17 y13 b17-H3PO4 y18 y17

  4. 11 TLPHVVNTMPHTSAMNRLTΔPVK [M+4H]4+ m/z: 631.82 y132+ b153+ b112+ y14-H2O2+ y193+ y3 y42+ b6 b8 y8-H3PO4 b2 y6-H3PO42+ b184+ b113+ y5-H3PO42+ y8 b4 b12-H2O

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