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Vocabulary Knowledge Center Update

Vocabulary Knowledge Center Update. VCDE Workspace July 21, 2011. Agenda. Tools Update Outreach Conferences and customers Knowledge Base Projects Knowledge Base Highlight Questions/Feedback. Tools Update Latest Releases. LexEVS 6.0 (2/1)

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Vocabulary Knowledge Center Update

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  1. Vocabulary Knowledge Center Update VCDE Workspace July 21, 2011

  2. Agenda • Tools Update • Outreach • Conferences and customers • Knowledge Base • Projects • Knowledge Base Highlight • Questions/Feedback

  3. Tools UpdateLatest Releases • LexEVS 6.0 (2/1) • Much anticipated release with pre-CTS2 functionality • Dev funding for 6.1 has paused temporarily • Open source opportunities (McGill University, BiKE) • NCI Protégé 1.4.3 (2/7) • Final release, before maintenance mode • LexWiki Publisher 2.0 (3/14) • Loads content from LexEVS into LexWiki • Very configurable, works on any terminology in LexEVS Migration to JIRA complete

  4. Tools UpdateLatest Releases • CDE Browser 4.0.2 (3/31) • NCBO BioPortal 3.1 (7/8) • CTS 2 Specification • Approved as a OMG beta specification • Please refer to the previous presentation for details

  5. OutreachConferences Past Future Past conferences Future conferences • AMIA 2011 TBI/CRI Joint Summit (Freimuth, Tao, Jiang) • Seoul National University at Rochester (many) • OMG SOA in Healthcare (Solbrig, Peterson, Stancl) • ICBO (Tao, Jiang, Pathak, Freimuth)

  6. OutreachCustomers New Tools fact sheet created for distribution • HSDB federation/OSU • OCRe Terminology curation set now • Center for Disease Control (CDC) • Reviewing PHIN VADS in light of CTS 2 • TRANSFoRm (European Health Care) • Specifically interested in Value Sets • McGill University (Canada) • Published paper on NCI EVS and BioPortal (in French) • Collaboration on loader for ATC (drug statistics terminology supported by the WHO)

  7. OutreachCustomers (continued) • Queensland Health (Australia) • Local ontology development, tie into to controlled • Seoul National University (BiKE) • 5 years development on LexCare Suite (EVS from 2005) • MoU for collaboration • Astrazeneca • Interest in services, curation, and workflow practices • MOH Holdings (Singapore) • Tested LexEVS, wants to use REST, may write their own

  8. OutreachCustomers (continued) • Universidade de Averio (Portugal) • ICD-9 to 10 mapping • Interested in mapping local to controlled • University of Ljubljana (Slovenia) • Raising awareness of NCI EVS to Ministry of Health • Preparing a comparision, LexEVS, Carecom, and one other • Cordelier Research Center • Wants to use LexEVS in distributed data warehouse

  9. Knowledge BaseExpanding the semantic universe • Semantic Web Technology Interest Group (SemTIG) • Semantic Media Wiki concepts, technologies, resources • Introduction to the semantic web • NCI Term Browser install • Tool Roadmaps

  10. Knowledge BaseExpanding the semantic universe • LexEVS 5.x to 6.0 migration • Removal of old LexGrid.org site • Navigation and indexing of the LexEVS Javadocs • NCI Term Browser usage video • LexWiki Publisher video • Updated LexEVS “Remote API’ to “Distributed”

  11. ProjectsNow and on the horizon • Public relations for the soon-to-be NCI Value Set Browser • Ontology Representation Working Group • LexEVS bug fixes • Differences between NCI-m and NCI-t • Library of Documents organization • Chinese page updates

  12. ProjectsNow and on the horizon • Migration from Media Wiki to Confluence thesaurus.cancer.gov ncit.cancer.gov ncit.nci.nih.gov nciterms.nci.nih.gov NCI term browsers wiki.nci.nih.gov NCI wiki dashboard evs.nci.nih.gov NCI EVS (about terminologies & browsers) VCDE work space cancer.gov NCI Cancer (gov) cabig.nci.nih.gov caBIG community web site (all work spaces) Redirects ncicb.nci.nih.gov Original NCI CB site cabig-kc.nci.nih.gov/Vocab/KC Vocabulary Knowledge Center VCDE work space Finding caBIG Tools Down loads GForge downloads

  13. VKCKnowledge Base Highlight • LexEVS Highlights(Main functions- qualifications) • Model • Authoring • Versioning • CTS • Mapping • Value Set • Pick List • Loaders • Exporters • Query • Web Services • Extensibility • Semantic Web • Other

  14. Questions and Feedback Email: VocabKC@mayo.edu Web site: http://cabig-kc.nci.nih.gov/Vocab/KC Forums: https://cabig-kc.nci.nih.gov/Vocab/forums/ Follow us on Twitter: http://twitter.com/VocabKC

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