Astrocyte Analysis
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Professor: Cheng-Chang Lu Subject: Image Processing. Astrocyte Analysis. By Rakesh Singrikonda [rsingrik@kent.edu] Rambabu Chelikani [rchelika@kent.edu] Manoj Thatikonda [mthatiko@kent.edu] Masters in Computer Science Kent State University. Table of contents. Astrocyte Structure
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Astrocyte Analysis
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- Professor: Cheng-Chang Lu Subject: Image Processing
Astrocyte Analysis
By RakeshSingrikonda [rsingrik@kent.edu] RambabuChelikani [rchelika@kent.edu] Manoj Thatikonda [mthatiko@kent.edu] Masters in Computer Science Kent State University - Table of contents Astrocyte Structure Goals Segmentation and approaches. Our process.
- What is astrocyte? These are star-shaped glial cells in the brain and spinal cord. These are the most abundant cell of the human brain. Astrocytes are a sub-type of glial cells in the central nervous system.
- structure
- Goals: automatically segment Individual Glial Cells. intelligent thresholding. Segmentation. seed points classification. classify astrocytes and provide volume and surface area.
- Segmentation it is the process of partitioning a digital image into multiple segments. it is used to locate objects or their boundaries.
- Approaches to segmentation: Simple thresholding. Edge detection. Watershed transformation. Etc….
- Simple thresholding How To Choose The Value For The Threshold T ? By Visual Inspections Based On The Accurate Image Level The Threshold Can Be Applied. Does not require specific knowledge about the image.
- Edge detection Edge Detection Extracts The Boundaries Of The Objects, Instead Of The Objects Themselves. Edge detection aims at identifying points in a digital image at which the image brightness changes sharply or more formally has discontinuities. Discontinuities in image brightness are likely to correspond to: discontinuities in depth discontinuities in surface orientation changes in material properties variations in scene illumination
- Watershed transformation Watershed Segmentation Is An Approach Developed To Solve The Very Common Problem Of Separating Touching Objects. Segmentation Failed To Separate Too Close Objects
- OUR Process Segmentation Thresholding, edge detection, watershed transformation
- Actual Image Cells after segmentation
- Center of mass map
- Centroid identification
- Test Results
- 3D identification results
- 3D identification results
- Summary of results
- References [1] V. Grau*, A. U. J. Mewes, M. Alcañiz, Member, IEEE, R. Kikinis, And S. K. Warfield, Member, IEEE “Improved Watershed Transform For Medical Image Segmentation Using Prior Information” Ieee Transactions On Medical Imaging, Vol. 23, No. 4, April 2004 [2] Salem Saleh Al-amri, N.V. Kalyankar And Khamitkar S.D “Image Segmentation By Using Thershod Techniques” Journal Of Computing, Volume 2, Issue 5, May 2010, Issn 2151-9617 [3] Takumi Uemura, Gou Koutaki and Keiichi Uchimura "Image Segmentation based on Edge Detection using Boundary code" International Journal of Innovative Computing, Information and Control, volume 7, Number 10, October 2011
- Thank You !!!
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