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Using NCBI

Using NCBI. Nancy B. Clark, M.Ed. Director of Medical Informatics Education FSU College of Medicine. All recourses are available online in Medical Informatics site under Topics: Research. Registering for NCBI. Register and get a Username and Password. Why get NCBI Account?.

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Using NCBI

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  1. Using NCBI Nancy B. Clark, M.Ed. Director of Medical Informatics Education FSU College of Medicine All recourses are available online in Medical Informatics site under Topics: Research

  2. Registering for NCBI Register and get a Username and Password

  3. Why get NCBI Account? • Save searches • Save citations in My Bibliography • Automatically update and e-mail search results from your saved searches • Filter search results • Highlighting search terms

  4. My NCBI

  5. Customize My NCBI Tutorials: http://www.nlm.nih.gov/bsd/disted/myncbi.html Saving Searches Saving References Customizing the Tabs Highlighting Search Terms 6

  6. My NCBI – Saving a Search Develop a search. Click on ‘Save Search’. April 29, 2008 Medical Informatics Seminar Session 6 7

  7. My NCBI – Saving a Search Give name and Save Complete form for email notification ‘My NCBI’ puts the search in your list.

  8. My NCBI – Saving References (1) Develop a search. Check the references you want to save. Click on ‘Send To’ and select ‘Clipboard’. April 29, 2008 Medical Informatics Seminar Session 6 9

  9. My NCBI – Saving References (2) Go to the ‘Clipboard’ Click on ‘Send To’ and select Collections.

  10. My NCBI – Saving References (3) Tell My NCBI what to call the collection Or Append to an existing collection April 29, 2008 Medical Informatics Seminar Session 6 11

  11. My NCBI – Saving References (4) To see the collection or saved search, click on ‘My NCBI’ > Collections Can download collections into a reference manager such as EndNote or RefWorks. 12

  12. My NCBI – Customizing the Filters Click on ‘My NCBI’ ‘Manage Filters’

  13. My NCBI – Customizing the Filters Try “Browse Filters” to see different types

  14. My NCBI – Highlighting Search Terms Click on ‘NCBI Site Preferences’. Click on ‘Highlighting’ Pick colors

  15. Have Journal Contents Sent (1) • Search ‘Journals Database’ • Enter a general subject term, e.g. “Pediatrics”, then ‘Go’. • Click on a journal title to get information about that journal. • Continue with another search for a Journal, find and select • Click on ‘Send to’ and select ‘Search Box with OR’.

  16. Have Journal Contents Sent (2) Click on ‘Search PubMed’. Click on ‘Save Search’, name it, and set up email as earlier. You will be notified when new articles are published in these journals.

  17. Links to Other NCBI Databases NCBI has other databases that link to PubMed. (examples: CoreNucleotide, Gene, HomoloGene, Protein, Protein) 19

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