'Long branch attraction' diaporamas de présentation

Phylip

written and distributed by Joe Felsenstein and collaborators (some of the following is copied from the PHYLIP homepage). Phylip. PHYLIP (the PHYL ogeny I nference P ackage) is a package of programs for inferring phylogenies (evolutionary trees).

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Bioinformatics ICES 2006

Bioinformatics ICES 2006. Molecular Evolution Revised 29/12/06. Phylogeny is the inference of evolutionary relationships All forms of life share a common origin. deduce the correct trees for all species of life

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Molecular Systematics Judd et al pp. 103-118

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Introduction: use of supertrees

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The (Supertree) of Life: Procedures, Problems, and Prospects

The (Supertree) of Life: Procedures, Problems, and Prospects. Presented by Usman Roshan. Supertree Methods. Input: Set of trees Output: Tree leaf-labeled by where is the set of leaves of . Why supertree methods?.

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Bootstrap ?

Bootstrap ?. See here. Maximum Likelihood and Model Choice. The maximum Likelihood Ratio Test (LRT) allows to compare two nested models given a dataset.

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