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Bioinformatics Education at North Central College

Bioinformatics Education at North Central College. Caroline St.Clair Professor of Computer Science. North Central College. Small Comprehensive Liberal Arts College 2800 undergraduate students 250 graduate students 146 biology majors, 57 computer science majors

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Bioinformatics Education at North Central College

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  1. Bioinformatics Education atNorth Central College Caroline St.Clair Professor of Computer Science

  2. North Central College Small Comprehensive Liberal Arts College • 2800 undergraduate students • 250 graduate students • 146 biology majors, 57 computer science majors • 6 biology and 4 computer science full-time faculty Bioinformatics • Interest sparked in 2004 • First course taught in 2005 • Little growth since

  3. Bioinformatics at North Central College Minor in bioinformatics Three years old Few minors No graduates yet Bioinformatics course Requirement in the minor Offered every other year Very low enrollment Bioinformatics topics infused in a number of biology courses and some computer science courses

  4. Bioinformatics Minor (19.75 credit hours) CSC 160 Computer Science I BIO/CSC 242 Introduction to Bioinformatics BIO 151 Biological Principles I BIO 152 Biological Principles II One course outside the student’s major from: CSC 161 Computer Science II, CSC 230 Discrete Structures, BIO 200 Cellular Biology, BIO 260 Genetics One course from the following: CSC 240 Algorithms, CSC 460 Database Systems, BIO 340 Microbiology, BIO 360 Molecular Bio of Cancer, BCM 365 Biochemistry, MTH 341 Prob and Stats, PSY 370 Biological Psychology

  5. Bioinformatics Course BIO/CSC 242 Introduction to Bioinformatics • Elective for biology and computer science majors • Required course for bioinformatics minor • Team taught course by CS and BIO faculty • Rigorous course • Project based – web exploration, guided programming project, on-your-own programming project • Great feedback from students who have taken the course

  6. Infusing Bioinformatics into Courses CSC 160/161 Computer Science I and II Perform transcription/translation Identify Shine-Dalgarno, promoter sequences BIO 151/152 Biological Principles I and II Phylogenetics – HIV/Texas Case Blast – DNA fingerprinting Other BIO courses use Blast and Phylogenetic tools

  7. Assessing Our Minor • Learning Outcomes • Students will be able to develop and evaluate algorithmic and computational solutions to problems in genetics and molecular biology. • Students will be able to apply the scientific method to complex problems in genetics and molecular biology. • Problems • Few minors • Lack of common upper-level course for the minor

  8. Our Goals • Grow the bioinformatics minor • Educate science faculty on how bioinformatics can be used in existing courses • Create a set of modules that can be used in a variety of courses

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