1 / 4

Concept of Data Extracting Software

This article discusses various data extracting software for LCMS analysis, focusing on their capabilities to import raw data, select retention time (RT) ranges, m/z ranges, and calculate centroid values for peptides across multiple files. Key software analyzed includes MagTran, HXExpress, Deuterator, DXMS, and HDExpress. The comparison highlights ExSAR’s HDExpress as superior for manual correction ease, while noting limitations of Deuterator in RT selection. The integration of automation with software is emphasized for effective analysis in the field.

sirvat
Télécharger la présentation

Concept of Data Extracting Software

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. Concept of Data Extracting Software Import raw data select RT range select m/z range calculate centroid value repeat for all peptides repeat for all files LCMS data file m/z RT

  2. Concept of Data Extracting Software Import raw data select RT range select m/z range calculate centroid value repeat for all peptides repeat for all files MagTran (Zhang) HXExpress (Weis) Deuterator (Scripps) DXMS (UCSD) HDExpress (ExSAR)

  3. Comparison of Data Extracting Software

  4. Around Data Extracting Software • ExSAR’s HDExpress is still the best software. Better than UCSD’s DXMS due to the easiness of manual correction, which is always necessary. • Scripps made Deuterator available via web. This software does not have good RT selection algorithm. While both HDExpress and DXMS can accommodate retention time shift in chromatogram, Deuterator can not. • Software and automation should go hands in hands.

More Related