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Analysis of Mean Intensity Post-RMA with Box Plots for Replicates and Probe Shifts

This analysis explores the mean intensity data of differential gene expression through box plots generated before and after Robust Multi-array Average (RMA) normalization. It covers replicates and compares histograms of mean intensities across various stages (31 to 38). Additionally, it evaluates the effects of shifting and scaling the data with different probe numbers. The study provides insights into the trends in mean intensities, highlighting comprehensive visualizations and metrics that aid in understanding expression data variations.

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Analysis of Mean Intensity Post-RMA with Box Plots for Replicates and Probe Shifts

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  1. A) PreRMA BoxPLots 14 12 10 Mean Intensity 8 6 a b c Replicates PostRMA BoxPLots 14 12 10 8 Mean Intensity 6 4 2 Stages 31 32 33 34 35 36 38 B) 40 30 20 Mean Intensity: Shifted and scaled 10 0 3’ 5’ Probe number 0 5 15 10

  2. C)

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