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Exploring Reversible Computation and Biological Physics

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This article delves into the concepts of reversible computation and biological physics, discussing topics like mRNA transcription, thermodynamic reversibility, and logic reversibility. It explores the Von Neumann – Landauer Limit and the implications of irreversible processes in information erasure and energy loss. The text outlines Bennett's Three-Tape Reversible Computation model and the steps involved in achieving reversibility. It also touches on the Carnot Cycle and the significance of maintaining physical and non-physical information integrity in computations.

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Exploring Reversible Computation and Biological Physics

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  1. Reversible Computation Avraham Guttman Topics in Biological Physics Prof. Elisha Moses, Dr. Roy Bar-Ziv R. Landauer, IBM J. Res. Dev. 3, 183(1961) Bennett, C. H., IBM J. Res. Dev. 17, 525 (1973) R. Landauer, Physica Scripta. Vol. 35, 88-95, 1987Feynman, Lectures on Computation, 1999

  2. T Reversible Computation - Outline • Thermodynamic Reversibility • Physics of Logic Reversibility • mRNA Transcription 0 1 0 1 0 1

  3. Memory Tape 0 1 0 0

  4. Single Bit Operation 0 1 0 1

  5. Carnot Engine http://galileoandeinstein.physics.virginia.edu/more_stuff/flashlets/carnot.htm

  6. Carnot Cycle Thermodynamically Reversible

  7. AND - Irreversible gate Loss of Information

  8. T Loss of free energy Physically Loss of Information 0 1

  9. von Neumann – Landauer Limit In each irreversible bit operation:

  10. Information Erasure Erasure Irreversible Process Loss of energy Infinite tape: No need for erasure Nonphysical For N erased bits:

  11. X Physical Reversible Copy Copier Model

  12. Bennetts’ Three-Tape Reversible Computation • Algorithm steps while saving • Copying the output • Retracing the algorithm steps R3 R2 R1 R1-1 R2-1 R3-1 Standard 0 1 0 1 0 1 0 1 0 1 0 1 0 1 0 1 0 1 1 0 1 History 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 R1 R2 R3 Copy 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 1 0 1 0 1 0 1 0 1 0 1

  13. mRNA Transcription from DNA to protein from DNA to protein

  14. mRNA Transcription =G,C,A,U RNA (N bases) +X-S-P-P-P RNA (N+1 bases) +P-Pi (Triphosphate) (Pyrophosphate) from DNA to protein Transistor:

  15. T Reversible Computation - Outline • Thermodynamic Reversibility • Physics of Logic Reversibility • mRNA Transcription 0 1 0 1 Thank You 0 1

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