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Gene expression is fundamental to cellular function, driven by the central dogma of molecular biology: DNA encodes genetic information, RNA serves as the carrier, and proteins execute cellular tasks. DNA, a linear polymer of nucleotides, contains the instructions for protein synthesis. Through transcription, genetic information is converted from DNA to messenger RNA (mRNA), followed by translation where tRNA decodes codons into amino acids, forming proteins. Understanding these processes is crucial for insights into cellular mechanisms, protein functions, and biotechnology applications.
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Gene Expression Defines Cells http://www.ornl.gov/hgmis
Recall the Central Dogma Info Info Carrier Functional Product DNA RNA PROTEIN
All Information is in DNA http://www.ornl.gov/hgmis
DNA is a Nucleic Acid • Principle information molecules in the cell • Linear polymer of nucleotides (or bases) • Two types • Deoxyribonucleic Acid – DNA • Information storage in cells • Ribonucleic Acid – RNA • Information carrier in cells
Nucleotides in DNA • Three components • Nitrogenous Base (A, C, G, T) • Ribose Sugar • Phosphate
DNA and RNA • For DNA bases are A, C, G, T • Sugar is deoxyribose (no OH at 2’ position) • For RNA bases are A, C, G. U • Sugar is ribose (OH at 2’ position)
Complementary Base Pairing • Holds nucleic acid strands together • H-bonding between complementary bases • This is an interaction that is easily broken • A pairs with T (DNA), (A-U for RNA) • G pairs with C (both DNA and RNA)
DNA is Transcribed http://commons.wikimedia.org/wiki/Image:DNA_transcription.gif
Transcription Initiation Promoter with Transcription Factors http://upload.wikimedia.org/wikipedia/commons/thumb/9/91/Simple_transcription_initiation1.svg/721px-Simple_transcription_initiation1.svg.png
Transcription and Translation http://stemcells.nih.gov/StaticResources/info/scireport/images/figurea6.jpg
Proteins Primary functional molecules of the cell; execute the tasks directed by the genetic material • Structural molecules (e.g., hair, fingernails, connective tissue) • Transmitting Information between cells (e.g., hormones) • Defense against infection (e.g., antibodies) • Enzymes (catalyze nearly all biochemical reactions)
Building Blocks are Amino Acids • 20 different amino acids in proteins • Chemical properties of side chains determine function • Central carbon atom (Ca) • H atom • Amino group (NH3+) • Carboxyl group (COO-) • R group (side chain)
R-group (Side Chain) • R -group determines identity, function • A.A. are categorized by chemical properties of the side chains 1) Polar (uncharged) = hydrophilic 2) Positively charged (basic) = ionic 3) Negatively charged (acidic) = ionic 4) Nonpolar = hydrophobic
Nonpolar Amino Acids The side chains of these a.a. tend to be located in the interior of proteins, where they are not in contact with water.
Peptide Bond • Links amino acids • Amide linkage between -NH3 and -COO- • Defines amino (N) terminus and carboxy (C) terminus
Protein Structure • Polypeptide (protein) chains fold into globular structure • Defines cracks and crevices that can interact with other molecules • Allows proteins to be enzymes
Enzymes • Enzymes are catalysts • They increase the rate of reactions • This allows rapid synthesis and degradation of products in cells
Building Proteins -Translation • mRNA contains 3 nucleotide codons • Each codon specifies an amino acid • Triplet codons are decoded by tRNA • decoding is base pairing between codon on mRNA and anticodon on tRNA • Each tRNA carries a specific amino acid • codon-anticodon pairing delivers specific aa to the growing polypeptide chain "protein: synthesis." Online Art. Britannica Student Encyclopædia. 10 Aug. 2008 <http://student.britannica.com/eb/art-1692>.
Overview of Gene Expression http://www.ornl.gov/hgmis