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Skull Stripper Extension

Skull Stripper Extension. Jim Miller GE Research. Part of a NA-MIC Collaboration Grant. PAR-07-249: R01EB006733 Development and Dissemination of Robust Brain MRI Measurement Tools PI - Dinggang Shen , UNC NA-MIC versions of HAMMER W hite matter lesion detection for MS. Skull Stripping.

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Skull Stripper Extension

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  1. Skull Stripper Extension Jim Miller GE Research

  2. Part of a NA-MIC Collaboration Grant PAR-07-249: R01EB006733 Development and Dissemination of Robust Brain MRI Measurement Tools PI - DinggangShen, UNC NA-MIC versions of HAMMER White matter lesion detection for MS

  3. Skull Stripping • Standard step in many neuro applications • Removes anatomy not relevent to the analysis • Improves robustness • Preliminary results for grant used FSL • Needed a skull stripper with a NA-MIC compatible license

  4. Skull Stripper Method • Similar to BET • Deformable model • Fuzzy tissue classification • Tested on OASIS database • DICE comparison to BET 0.948 • XiaodongTao ; Ming-Ching Chang; A skull stripping method using deformable surface and tissue classification. Proc. SPIE 7623, Medical Imaging 2010: Image Processing, 76233L (March 12, 2010); doi:10.1117/12.844061.

  5. Skull Stripper Extension • Single CLI module • Not a complete neuro analysis workflow • Packaged for re-use

  6. Extensions manager

  7. Skull Stripper Module

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