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This paper provides an overview of data quality (DQ) issues related to the Ocean Biogeographic Information System (OBIS), discusses existing DQ methods, and presents a case study utilizing outlier detection techniques, specifically DBSCAN, to identify erroneous data points in multidimensional datasets. DQ problems can originate throughout the data life cycle, from data gathering to analysis. The study emphasizes the necessity of integrating expert knowledge and various DQ methods to enhance data integrity and accuracy for better analysis and modeling.
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Erroneous Distribution Data Identification Using Outlier Detection Techniques W. Zhuang, Y. Zhang, J.F. Grassle Rutgers, the State University of New Jersey, USA
Overview • Review of OBIS DQ-issues • Review of existing DQ methods • Case study: detecting outliers in multidimensional data • Discussion and future directions
Data Quality (DQ) DQ problems can be generated in every steps of the data life cycle:
DQ problems (I) • Data gathering: instrument failures; false identifications geo-referencing • Data storage key metadata missing erroneous data entry; database default values masquerading as real values
DQ problems (II) • Data delivery: data corruption due to encoding conversion • Data integration: duplicated records • Data retrieval: missing values • Data analysis/cleaning: inappropriate models used, etc.
DQ solving-a process-based approach • DQ solving is an essential component of data analysis and thus part of the data life cycle • A. It builds foundation for analysis and modeling • B. It provides feedbackto improve the whole data life cycle • C. It could lead to more DQ problems if not carefully executed
DQ solving methods • Harvest metadata close to data • Built-in integrity check and double data entry • Model-based approach: a) statistical b) heuristic
OBIS DQ Study • Metadata-related problems • DQ on scientific names • Integrity checking • Redundant records detection • Outliers detection- a case study Outliers sometimes represent erroneous data We are examining data mining tools fordetecting erroneous data points
DBSCAN-a clustering tool • DBSCAN is density-based in feature space • It deals with high dimensional data • There is no need to specify cluster numbers • It identifies outliers during the clustering process • It is a fast algorithm and freely available • M.Ester, H.P.Kriegel, J.Sander and Xu. A density-based algorithm for discovering clusters in large spatial databases
A diagram of DBSCAN Outlier Border = 1unit MinPts = 5 Core
Limitation of the method • Geographical outliers may be used to identify erroneous points in survey data, but may not good for museum collections or literature-based data records. • Other methods to identify erroneous distribution data ? How about using environmental data as proxies?
Limitations of using environmental variables • Risk of imposing a rigid model at the time of pre-processing • Risk of losing valuable outliers • Risk of circular logic in later analyses
Discussions • Why don’t you use more environmental variables? • Can you use DBSCAN on environmental variables directly?
Possible improvements • Define multiple methods as DQ components • Assign bootstrap weights • Present outlier candidates to experts • Update weights based on user feedback
Summary • Many data quality problems can arise during the whole data life cycle. • Preliminary checking can eliminate a lot of simple errors • Expert knowledge should be integrated and be the decisive factor when it comes to DQ solving • Data mining techniques may act as metal detectors so that experts can focus on a narrowed down group of candidates