Plant Physiology

1. Plant Physiology Roots, Cell differentiation and Senescence

2. Root Development Four developmental zones Root Cap: protects apical meristem from mechanical injury, secrete Mucopolysaccharides that helps the root penetrate the soil Meristematic Zone: lies under the root cap, produces only primary roots Elongation Zone: site of rapid and extensive cell elongation Maturation Zone: cell elongation stops and cells become mature.

3. Stages of root development Anticlinal and Periclinal cell division?

4. Different types of stem cells are found in root apical meristem 4 Center Cells Pericycle+Vascular tissues Cortical, Endodermal layer Anticlinal-Epidermis Root Cap Periclinal-Lateral Root Cap

5. Cell differentiation Differentiation: both ways Totipotency: the ability of a single cell to divide and produce all the differentiated cells in an organism • Tracheary Elements: Vessel elements+Tracheids • facilitatewater and solute movement • Construct secondary wall composed of cellulose and lignin

6. Cells of adult plants remain totipotent: cloning a carrot Regenerated adult plant… 1 mm3 fragments (“explants”) from adult root… Induce with hormones to initiate shoot and root formation e.g. Auxin, Cytokinin, Ethylene Culture “embroid” in liquid culture, then agar… Culture explants in liquid culture medium… Cells “dedifferentiate” and begin to divide, forming “callus” tissue… Move to soil…

7. Developmental Pathways Transcription Factors • 1500 in Arabidopsis • MADS box TFs • 30 in Arabidopsis • Developmental events in roots, leaves, flower, ovule and fruit • Homeobox TFs • Contain Homeodomain • KNOTTED1 (KN1) involved in shoot apical meristem maintenance Cell Signaling Different proteins, hormones interact to control plant development

8. Protein Kinases • Mitogen Activated Protein Kinases • Protein Phosphorylation • Arabidopsis MPK4 Arabidopsis 60 MKKKs 10 MKKs 20 MAPKs • Receptor Kinases • Contain receptor domain CLAVATA-mutations increased size of vegetative shoot apical and floral meristems • Receptor Ligand • Small proteins or peptides that activates the receptor kinases

9. Leaves in fall tell a story about life and death

10. Plant Senescence and Organ Abscission • Concept • Senescence: A program in which the function of organ or whole plant naturally declines to death. This is a genetically programmed essential phase of the growth and development in plant. • Abscission: Specific cells in petiole form an abscission layer, thus facilitating the senescent organ to separate from the plant

11. Types of plant senescence • (1) Overall Senescence • Senescence occurs in whole plant body, such as annuals which senesces to death after flower and setting.

12. (2)Top Senescence • The part aboveground dies with the end of growth season but the part underground is alive for several years. • Perennial weeds , corm and bulb——lily. In summer In winter

13. (3) Deciduous senescence • The leaf falls in specious season, in summer or winter. • Deciduous • trees

14. (4)Progressive senescence • Senescence only occurs in older organ or tissue.New organ or tissue develops while old ones are senescing. • Green trees。

15. (A) Development of Arabidopsis thaliana plants is shown at various times after germination. Photographs show plants at 14, 21, 37, and 53 days after germination ( left to right). Note the yellowing of shoots of the 53-day-old plant. (B) Age-related changes in rosette leaves of Arabidopsis 7, 9, and 11 days after leaf expansion had ceased. Note the progressive yellowing of leaves, beginning farthest from the main veins Senescence in Arabidopsis thaliana.

16. Arabidopsis mutants affected in senescence

17. Arabidopsis leaf senescence Rice leaf senescence

18. Abscission zone at base of leaf at the where it joints the stem leaf stem

19. Auxin prevents abscission

20. Senescence Regulation SAG (up-regulated during leaf senescence) Class I SAG Senescence associated genes expressed only during senescence (senescence-specific). SDG Senescence down regulated genes include chlorophyll a/b-binding protein gene (CAB), Rubisco small subunit gene (SSU). Class II SAG Senescence associated genes have basal level of expression during early leaf development, but expression increases during senescence Basal expression (SAG II) Leaf develops to full expansion Senescence progression Onset (SAG I)

21. Leaf Senescence in Arabidopsis Class I – genes that control developmental aging Class II – genes that control both senescence and other growth processes Class III- genes that control senescence in response to environmental factors Class IV- regulatory genes that up-regulate senescence activity AND down regulate cellular maintenance activities Class V- genes that control degradation of senescence regulatory factors

22. Programmed cell death is a specialized type of senescence Senescence can occur at the level of: whole plant (monocarpic senescence) Organ(leaf senescence) Cell(tracheary element differentiation) Process whereby individual cells activate an intrinsic senescence program = Programmed Cell Death (PCD) In animals, PCD may be initiated by specific signals (errors in DNA replication during division) - involves expression of a characteristic set of genes, resulting in cell death - accompanied by morphological and biochemical changes (apoptosis, Greek: “falling off”) - during apoptosis, cell nucleus condenses and DNA fragments in a specific pattern

23. Programmed cell death is a specialized type of senescence PCD in plants, less well characterized - but similar histological changes as in animals observed - PCD occurs during differentiation of xylem tracheary elements, during which nuclei and chromatin degrade and cytoplasm disappears → activation of genes encoding nucleases and proteases - protection against pathogenic organisms - infection by pathogen causes plant cells to quickly accumulate high concentrations of toxic phenolic compounds and die (it’s not quite as simple) → dead cells form small circular island of cell death (necrotic lesion) - necrotic lesions isolate and prevent infection from spreading to surrounding healthy tissues by surrounding the pathogen with a toxic and nutritionally depleted environment (hypersensitive response)