'Regulatory network' diaporamas de présentation

Reconstructing gene regulatory networks with probabilistic models

Reconstructing gene regulatory networks with probabilistic models. Dirk Husmeier. Marco Grzegorczyk. Regulatory network. Network unknown. High-throughput experiments. Postgenomic. data. Machine learning. Statistics. Overview. Introduction Bayesian networks Comparative evaluation

1.32k views • 113 slides

Detecting topological patterns in complex networks

Detecting topological patterns in complex networks. Sergei Maslov Brookhaven National Laboratory. Networks in complex systems. Complex systems Large number of components They interact with each other

1.08k views • 84 slides

Computational methods to inferring cellular networks

Computational methods to inferring cellular networks. Stat 877 Apr 15 th 2014 Sushmita Roy. Goals for today. Introduction Different types of cellular networks Methods for network reconstruction from expression Per- gene vs Per-module methods Sparse Candidates Bayesian networks

849 views • 66 slides

Computational methods to inferring cellular networks

Computational methods to inferring cellular networks. Stat 877 Apr 15 th 2014 Sushmita Roy. Goals for today. Introduction Different types of cellular networks Methods for network reconstruction from expression Per- gene vs Per-module methods Sparse Candidates Bayesian networks

798 views • 66 slides

Adaptive evolution in prokaryotic transcriptional regulatory networks

Adaptive evolution in prokaryotic transcriptional regulatory networks. M. Madan Babu, PhD. NCBI, NLM National Institutes of Health. Network. Metabolic. Protein Interaction. Transcriptional. Proteins. Nodes Links. Metabolites. Transcription factor Target genes. Enzymatic

666 views • 53 slides

Structure, evolution and dynamics of gene regulatory networks

Structure, evolution and dynamics of gene regulatory networks. M. Madan Babu. Group Leader MRC Laboratory of Molecular Biology, Cambridge. Network. Metabolic. Protein Interaction. Transcriptional. Proteins. Nodes Links. Metabolites. Transcription factor Target genes. Enzymatic

677 views • 52 slides

Structure and evolution of prokaryotic transcriptional regulatory networks

Structure and evolution of prokaryotic transcriptional regulatory networks. M. Madan Babu. Group Leader MRC Laboratory of Molecular Biology Cambridge. Network. Metabolic. Protein Interaction. Transcriptional. Proteins. Nodes Links. Metabolites. Transcription factor Target genes.

618 views • 52 slides

V11: Genetic networks

V11: Genetic networks. Methods to describe genetic networks: (1) boolean networks (today) (2) clustering gene expression data ( ? Bioinformatics II lecture) Clustering is a relatively easy way to extract useful information out of large-scale gene expression data sets.

502 views • 38 slides

Inferring Transcriptional Regulatory Networks from Gene Expression Data II

506 views • 36 slides

Gene Regulatory Networks - the Boolean Approach

Andrey Zhdanov Based on the papers by Tatsuya Akutsu et al and others. Gene Regulatory Networks - the Boolean Approach. Gene Expressions Revisited. Gene Regulatory Networks - the Boolean Approach. Gene Expressions Revisited. One of the major subjects of study in cell

309 views • 29 slides

Transcription factor binding sites and gene regulatory network

Transcription factor binding sites and gene regulatory network. Victor Jin Department of Biomedical Informatics The Ohio State University. Transcription in higher eukaryotes. Gene Expression Chromatin structure Initiation of transcription Processing of the transcript

532 views • 25 slides

Systems Biology for TB

Systems Biology for TB. Gary Schoolnik James Galagan. Systems Approach to TB. Combine genomic technology with computational methods to model TB metabolic and regulatory networks. Metabolic Network Model. Regulatory Network Model. An International Collaboration.

333 views • 24 slides

Introduction to Probabilistic Models for Computational Biology

336 views • 23 slides

The ultimate complex system: networks in molecular biology

277 views • 23 slides

Transcription factor binding sites and gene regulatory network

Transcription factor binding sites and gene regulatory network. Victor Jin Department of Biomedical Informatics The Ohio State University. Transcription in higher eukaryotes. Gene Expression Chromatin structure Initiation of transcription Processing of the transcript

274 views • 23 slides

PBB: A Parallel Bioinformatics Benchmark Suite for Shared Memory Multiprocessors

PBB: A Parallel Bioinformatics Benchmark Suite for Shared Memory Multiprocessors. CHEN Wenguang HPC Inst., CS Dept., Tsinghua University. Outlines. Motivation Benchmark selection & construction Benchmark characteristics Performance results Conclusions, Q&A. Motivation.

334 views • 17 slides

Sequence data

181 views • 9 slides

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91 views • 2 slides