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Multimodal Brain Imaging

Multimodal Brain Imaging. Will D. Penny FIL, London. Guillaume Flandin, CEA, Paris Nelson Trujillo-Barreto, CNC, Havana. Neuronal Activity. Experimental Manipulation. Optical Imaging. MEG,EEG. PET. fMRI. FORWARD MODELS. Single/multi-unit recordings. Spatial convolution

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Multimodal Brain Imaging

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  1. Multimodal Brain Imaging Will D. Penny FIL, London Guillaume Flandin, CEA, Paris Nelson Trujillo-Barreto, CNC, Havana

  2. Neuronal Activity Experimental Manipulation Optical Imaging MEG,EEG PET fMRI FORWARD MODELS Single/multi-unit recordings Spatial convolution via Maxwell’s equations Sensorimotor Memory Language Emotion Social cognition Temporal convolution via Hemodynamic/Balloon models

  3. Neuronal Activity Experimental Manipulation MEG,EEG fMRI INVERSION 1. Spatio-temporal deconvolution Spatial deconvolution via beamformers 2. Probabilistic treatment Temporal deconvolution via model fitting/inversion

  4. Overview • Spatio-temporal deconvolution for M/EEG • Spatio-temporal deconvolution for fMRI • Towards models for multimodal imaging

  5. Add temporal constraints in the form of a General Linear Model to describe the temporal evolution of the signal. Puts M/EEG analysis into same framework as PET/fMRI analysis. Work with Nelson. Described in chapter of new SPM book. Spatio-temporal deconvolution for M/EEG

  6. Generative Model: Hyperpriors:

  7. Repeat L • Update source estimates, q(j) • Update regression coefficients, q(w) • Update spatial precisions, q(a) • Update temporal precisions, q(l) • Update sensor precisions, q() KL F Until change in F is small Variational Bayes: Mean-Field Approximation

  8. Mean-Field Approximation: Approximated posteriors:

  9. Corr(R3,R4)=0.47

  10. 700ms 500ms 2456ms 600ms Fa o + + + Time Sa + o Sb + + High Symmetry Low Symmetry Low Asymmetry High Asymmetry Phase 1 Ub Henson R. et al., Cerebral Cortex, 2005

  11. A1 Faces minus Scrambled Faces B8 170ms post-stimulus

  12. B8 A1 Faces Scrambled Faces

  13. Daubechies Cubic Splines Wavelets

  14. Daubechies-4 28 Basis Functions 30 Basis Functions

  15. ERP Faces ERP Scrambled

  16. t = 170 ms

  17. Faces – Scrambled faces: Difference of absolute values t = 170 ms

  18. Temporal evolution is described by GLM in the usual way. Add spatial constraints on regression coefficients in the form of a spatial basis set eg. spatial wavelets. Automatically select the appropriate basis subset using a mixture prior which switches off irrelevant bases. Embed this in a probabilistic model. Work with Guillaume. To appear in Neuroimage very soon. Spatio-temporal deconvolution for fMRI

  19. Spatial Model eg. Wavelets

  20. Mixture prior on wavelet coefficients • Wavelet switches: d=1 if coefficient is ON. Occurs with probability p • If switch is on, draw z from the fat Gaussian.

  21. Probabilistic Generative Model Switch priors Wavelet switches Wavelet coefficients Spatial Model General Linear Model Temporal Model fMRI data

  22. Compare to (i) GMRF prior used in M/EEG and (ii) no prior

  23. Inversion using wavelet priors is faster than using standard EEG priors

  24. Results on face fMRI data

  25. Use simultaneous EEG- fMRI to identify relationship Between EEG and BOLD (MMN and Flicker paradigms) EEG is compromised -> artifact removal Testing the `heuristic’ Start work on specifying generative models Ongoing work with Felix Blankenburg and James Kilner Towards multimodal imaging

  26. fMRI results

  27. fMRI results

  28. MRI Gradient artefact removal from EEG We have “synchronized sEEG-fMRI” – MR clock triggers both fMRI and EEG acquisition; after each trigger we get 1 slice of fMRI and 65ms worth of EEG. Synchronisation makes removal of GA artefact easier

  29. Ballistocardiogram removal Could identify QRS complex from ECG to set up a ‘BCG window’ for subsequent processing

  30. Ballistocardiogram removal

  31. Ballistocardiogram removal

  32. Testing the heuristic • The EEG-BOLD heuristic (Kilner, Mattout, Henson & Friston) contends that • increases in average EEG frequency predict BOLD activation. g(w) = spectral density

  33. RMSF for Marta’s data at Cz

  34. Log of Bayes factor for Heuristic versus Null

  35. Log of Bayes factor for Heuristic versus Alpha

  36. Tentative probabilistic generative model

  37. THANK-YOU FOR YOUR ATTENTION !

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