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Term Project Proposal Presentation

Term Project Proposal Presentation. 2006. 06. 12. Database : Online Mendelian Inheritance in skin with OMIM DB. Introduction. Online Mendelian Inheritance in Man (OMIM)

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Term Project Proposal Presentation

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  1. Term Project Proposal Presentation 2006. 06. 12

  2. Database : Online Mendelian Inheritance in skin with OMIM DB

  3. Introduction Online Mendelian Inheritance in Man (OMIM) OMIM is a continuously updated catalogue of human genes and genetic disorders. OMIM focuses primarily on inherited, or heritable, genetic diseases. It is considered to be a phenotypic companion to the human genome project. OMIM is based upon the text Mendelian Inheritance in Man, authored and edited by Dr. Victor A. McKusick and a team of science writers and editors at Johns Hopkins University and elsewhere. Mendelian Inheritance in Man(MIM) is now in its 12th edition. See McKusick, V.A.: Mendelian Inheritance in Man. 12th ed., Baltimore: Johns Hopkins University Press, 1998.

  4. Purpose - Limitation of datas about skin genetic disorders in OMIM - the updated data in other databases is considerably insufficient. OMIK(Online Mendlian Inheritance in Korea) : information is simple and Page error 국립보건원<유전질환 DB> : late update Korea Cytogenetic DB : page error - All of the database is not up to date ( old ) - Databases include overlapped cytogenetic DB - contents of the databases are insufficient for professional and accuracy

  5. Method OMIM Get id from html pages(/omimhtml) ( skin search ) Method : python 2.4 Searched results with skin : 2189 Raw data Download the pages(/omimsubhtml) with id Method : python 2.4 html data Extract the datas from downloaded pages Method : python 2.4

  6. Method extracted data insert datas (text file)to the data table Method : MS Access !! but except data if data is too large to insert to the table Data table Make form for the table Method : MS Access form Coding to add search function with visual basic Method : MS Access (visual basic) Skin DB

  7. Result search Title OMIM id

  8. Result In the Searched data If click the OMIMlink, If click the Genelocus,

  9. Discussion - Skin database can be used to search genetic disorders in skin. - The information in this database is easier to see and understand through visualization datas and picture informations than previous OMIM DB. - DB is not linked to the web. - But this skin DB have limitations.  Most part of the information in DB exist in OMIM DB.  Earning the pictures about genetic disorder is difficult. ( shortage of knowledge)

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